Co-expression analysis

Gene ID	1611682_at
Gene name
Homology with Arabidopsis	Similar to At1g69040: ACR4 (ACT REPEAT 4) (HF=3e-2)
Module size	6 genes
NF	0.89
%ile	99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.86	1611682_at	CB036119	-	-	3e-2	At1g69040	ACR4 (ACT REPEAT 4)	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.85	1609875_at	AY156047.1	protease inhibitor /// similar to protease inhibitor	-	3e+0	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.86	1607288_at	CK136901.1	-	-	8e+0	At4g30180	transcription factor/ transcription regulator	O.I.	H.G.	S.X.	Please select
0.91	98.8	0.87	1611666_s_at	AY156047.1	protease inhibitor	-	3e+0	At5g41420	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.86	1607320_s_at	CF203023.1	hypothetical protein LOC100260054 /// hypothetical protein LOC100249816 /// hypothetical protein LOC100254961 /// hypothetical protein LOC100263489 /// hypothetical protein LOC100265260	-	6e+0	At5g52690	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.63	84.3	0.85	1611611_at	CB980376	hypothetical protein LOC100259980	-	1e-1	At1g72610	GER1 (GERMIN-LIKE PROTEIN 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.0	88.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
1.9	87.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.8	86.0	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.7	84.7	GSM147714	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	43
1.7	84.7	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.7	84.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.7	84.7	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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