Co-expression analysis

Gene ID 1611682_at
Gene name
Homology with ArabidopsisSimilar to At1g69040: ACR4 (ACT REPEAT 4) (HF=3e-2)
Module size 6 genes
NF 0.89
%ile 99.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.861611682_atCB036119--3e-2At1g69040ACR4 (ACT REPEAT 4)O.I.H.G.S.X.
0.9198.80.851609875_atAY156047.1protease inhibitor /// similar to protease inhibitor-3e+0At5g41420unknown proteinO.I.H.G.S.X.
0.9198.80.861607288_atCK136901.1--8e+0At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.
0.9198.80.871611666_s_atAY156047.1protease inhibitor-3e+0At5g41420unknown proteinO.I.H.G.S.X.
0.7390.80.861607320_s_atCF203023.1hypothetical protein LOC100260054 /// hypothetical protein LOC100249816 /// hypothetical protein LOC100254961 /// hypothetical protein LOC100263489 /// hypothetical protein LOC100265260-6e+0At5g52690heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6384.30.851611611_atCB980376hypothetical protein LOC100259980-1e-1At1g72610GER1 (GERMIN-LIKE PROTEIN 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.591.9GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
2.088.2GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
1.987.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.886.0GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.886.0GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM147714Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation43Link to GEO
1.784.7GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.784.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
1.784.7GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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