Co-expression analysis

Gene ID	1611681_at
Gene name	hypothetical protein LOC100241604
Homology with Arabidopsis	Similar to At5g39360: EDL2 (EID1-like 2) (HF=4e+0)
Module size	6 genes
NF	0.15
%ile	24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	94.6	0.97	1611681_at	CF513131	hypothetical protein LOC100241604	-	4e+0	At5g39360	EDL2 (EID1-like 2)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1610836_at	CF208642	hypothetical protein LOC100257386	-	5e-10	At4g16760	ACX1 (ACYL-COA OXIDASE 1)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.97	1616489_s_at	BQ800343	hypothetical protein LOC100267925	-	7e-12	At2g14910	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1612816_at	CB001913	hypothetical protein LOC100259862	-	6e+0	At4g05530	IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1616034_at	CA817525	similar to BTB/POZ domain-containing protein	-	4e-23	At4g08455	BTB/POZ domain-containing protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.97	1618880_at	CF214283	hypothetical protein LOC100241859	-	1e-17	At4g27750	ISI1 (IMPAIRED SUCROSE INDUCTION 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.2	94.9	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.1	89.1	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.1	89.1	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.0	88.2	GSM147712	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	41
1.9	87.2	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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