Co-expression analysis

Gene ID 1611681_at
Gene name hypothetical protein LOC100241604
Homology with ArabidopsisSimilar to At5g39360: EDL2 (EID1-like 2) (HF=4e+0)
Module size 6 genes
NF 0.15
%ile 24.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.971611681_atCF513131hypothetical protein LOC100241604-4e+0At5g39360EDL2 (EID1-like 2)O.I.H.G.S.X.
0.1616.70.971610836_atCF208642hypothetical protein LOC100257386-5e-10At4g16760ACX1 (ACYL-COA OXIDASE 1)O.I.H.G.S.X.
0.1414.40.971616489_s_atBQ800343hypothetical protein LOC100267925-7e-12At2g14910unknown proteinO.I.H.G.S.X.
0.1313.30.981612816_atCB001913hypothetical protein LOC100259862-6e+0At4g05530IBR1 (INDOLE-3-BUTYRIC ACID RESPONSE 1)O.I.H.G.S.X.
0.1212.10.971616034_atCA817525similar to BTB/POZ domain-containing protein-4e-23At4g08455BTB/POZ domain-containing proteinO.I.H.G.S.X.
0.077.80.971618880_atCF214283hypothetical protein LOC100241859-1e-17At4g27750ISI1 (IMPAIRED SUCROSE INDUCTION 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.893.4GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO
2.189.1GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.189.1GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
2.189.1GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
2.088.2GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
1.987.2GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage