Co-expression analysis

Gene ID	1611657_at
Gene name	hypothetical protein LOC100253161
Homology with Arabidopsis	Similar to At2g34680: AIR9 (HF=4e-3)
Module size	7 genes
NF	0.54
%ile	80.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.97	1611657_at	CF208861	hypothetical protein LOC100253161	-	4e-3	At2g34680	AIR9	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.96	1622732_at	CF372633	hypothetical protein LOC100247887	-	3e-10	At5g60460	sec61beta family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1619869_at	CF513928	hypothetical protein LOC100263034	-	3e-1	At4g20970	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.97	1615938_at	CF208490	hypothetical protein LOC100244729	-	8e-51	At5g62700	TUB3	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.97	1616780_at	CF415162	hypothetical protein LOC100265405	-	2e-8	At5g60210	-	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.97	1611158_at	CF515951	hypothetical protein LOC100260886	-	5e-12	At1g35780	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1610422_at	CF215178	hypothetical protein LOC100246625	-	5e-12	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.7	93.0	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.5	91.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.4	91.3	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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