Co-expression analysis

Gene ID 1611645_at
Gene name hypothetical protein LOC100252175
Homology with ArabidopsisSimilar to At1g11360: universal stress protein (USP) family protein (HF=4e-1)
Module size 6 genes
NF 0.57
%ile 83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.961611645_atCB349661hypothetical protein LOC100252175-4e-1At1g11360universal stress protein (USP) family proteinO.I.H.G.S.X.
0.6081.90.971619887_atCB976758hypothetical protein LOC100255748-4e-10At1g19740ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.6081.90.971607155_atCD718615hypothetical protein LOC100266884-2e-6At1g50020unknown proteinO.I.H.G.S.X.
0.5072.70.961620884_atCF372800hypothetical protein LOC100255959-1e-63At1g68830STN7 (Stt7 homolog STN7)O.I.H.G.S.X.
0.4666.50.971609024_s_atCA818633hypothetical protein LOC100242371-6e-25At5g57040lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.3039.40.971620267_atCB972336hypothetical protein LOC100264696-7e-9At5g20140SOUL heme-binding family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.498.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.298.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.098.0GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.497.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.692.5GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.692.5GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.591.9GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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