Co-expression analysis

Gene ID	1611638_at
Gene name
Homology with Arabidopsis	Similar to At5g26673: - (HF=3e+0)
Module size	14 genes
NF	0.46
%ile	68.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	89.5	0.95	1611638_at	CB971322	-	-	3e+0	At5g26673	-	O.I.	H.G.	S.X.	Please select
0.54	75.7	0.96	1616780_at	CF415162	hypothetical protein LOC100265405	-	2e-8	At5g60210	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.96	1608574_at	CF414345	hypothetical protein LOC100249220	-	6e-2	At3g63095	-	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.96	1614512_at	CF212309	-	-	4e-12	At4g39900	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.9	0.96	1615302_at	CF414670	-	-	7e-1	At3g44716	unknown protein	O.I.	H.G.	S.X.	Please select
0.49	69.3	0.96	1612711_at	CD003728	hypothetical protein LOC100261895	-	5e-1	At1g74929	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.96	1620583_s_at	CF213679	hypothetical protein LOC100247041	-	5e-1	At4g24231	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.97	1619869_at	CF513928	hypothetical protein LOC100263034	-	3e-1	At4g20970	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.97	1617368_at	CF512540	similar to beta-1,3-glucanase	-	1e+0	At2g47110	UBQ6	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1616611_at	CF404283	-	-	2e-1	At2g33220	-	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1609574_at	CF212064	hypothetical protein LOC100251235	-	2e-17	At1g19330	unknown protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.96	1618801_at	CF208981	-	-	8e-3	At5g48500	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1607678_at	CB972163	hypothetical protein LOC100254822	-	3e-25	At2g34710	PHB (PHABULOSA)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.96	1609008_at	CB975099	-	-	1e+0	At5g36500	-	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.7	93.0	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.6	92.5	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.2	89.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.1	89.1	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.1	89.1	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.1	89.1	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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