Co-expression analysis

Gene ID 1611529_at
Gene name hypothetical protein LOC100247678
Homology with ArabidopsisSimilar to At5g55250: IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1) (HF=2e-1)
Module size 18 genes
NF 0.64
%ile 90.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.851611529_atCF208335hypothetical protein LOC100247678-2e-1At5g55250IAMT1 (IAA CARBOXYLMETHYLTRANSFERASE 1)O.I.H.G.S.X.
0.8193.70.891608165_atCF205571.1--2e+0At1g03660-O.I.H.G.S.X.
0.8193.70.881614549_atCK136881.1--2e-1At5g46310WRKY family transcription factorO.I.H.G.S.X.
0.7992.70.891617743_atCF201643.1--2e-12At1g52870peroxisomal membrane protein-relatedO.I.H.G.S.X.
0.7992.70.921616794_atCF205534.1--3e-26At3g58680MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B)O.I.H.G.S.X.
0.7591.30.911618231_atAF141642.1--8e-50At2g37170PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2)O.I.H.G.S.X.
0.7491.00.911617744_x_atCF205571.1--2e+0At1g03660-O.I.H.G.S.X.
0.7390.80.881612424_atCF202035.1--8e-4At2g47730ATGSTF8 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8)O.I.H.G.S.X.
0.7189.50.881609224_atCF203372.1--4e+0At5g54745DegP protease familyO.I.H.G.S.X.
0.7088.60.891611368_atCF203753.1--6e-18At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.6787.90.891617586_atCF204850.1--4e-10At3g56310alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putativeO.I.H.G.S.X.
0.6787.90.921615840_atCF206240.1--2e-36At2g17420NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A)O.I.H.G.S.X.
0.5375.20.861607096_x_atCF204272.1--8e-4At4g00430PIP1O.I.H.G.S.X.
0.4767.70.921619492_atCK136879.1--5e+0At5g65410HB25 (HOMEOBOX PROTEIN 25)O.I.H.G.S.X.
0.4564.60.911615025_atCK138150.1--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.3751.70.911622617_x_atCF203983.1--3e-25At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.3650.70.931614101_atCF569218.1--4e+0At5g45973unknown proteinO.I.H.G.S.X.
0.3650.70.911607051_x_atCK138150.1--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.896.4GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436357Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436415V. riparia (VR, PI588259) SD, 13h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM436417V. riparia (VR, PI588259) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.683.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.683.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.683.3GSM436421V. riparia (VR, PI588259) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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