Co-expression analysis

Gene ID 1611524_at
Gene name hypothetical protein LOC100253364
Homology with ArabidopsisSimilar to At4g25386: unknown protein (HF=1e+0)
Module size 7 genes
NF 0.08
%ile 15.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.771611524_atCF215063hypothetical protein LOC100253364-1e+0At4g25386unknown proteinO.I.H.G.S.X.
0.7390.80.841610782_s_atCF215063hypothetical protein LOC100253364-1e+0At4g25386unknown proteinO.I.H.G.S.X.
0.3650.70.871616092_atCA818026--7e-2At1g11680CYP51G1 (CYTOCHROME P450 51G1)O.I.H.G.S.X.
0.3345.70.901609526_atCF210472hypothetical protein LOC100261349-2e+0At5g47520AtRABA5a (Arabidopsis Rab GTPase homolog A5a)O.I.H.G.S.X.
0.056.00.871615034_atCF214412--4e+0At5g54790unknown proteinO.I.H.G.S.X.
0.034.20.851619210_atAF056622.1Cu/Zn superoxide dismutase-like-9e-46At2g28190CSD2 (COPPER/ZINC SUPEROXIDE DISMUTASE 2)O.I.H.G.S.X.
0.034.20.861611115_s_atCB344303hypothetical protein LOC100244716-3e-20At3g21700SGP2O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
3.094.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.793.0GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.591.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.491.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.390.7GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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