Co-expression analysis

Gene ID 1611481_s_at
Gene name hypothetical protein LOC100254523
Homology with ArabidopsisSimilar to At3g12490: cysteine protease inhibitor, putative / cystatin, putative (HF=2e+0)
Module size 12 genes
NF 0.36
%ile 53.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.971611481_s_atBQ796815hypothetical protein LOC100254523-2e+0At3g12490cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5072.70.981619901_atBQ794318hypothetical protein LOC100258001-4e+0At5g42410auxin-responsive family proteinO.I.H.G.S.X.
0.4868.80.981606519_atCB342417hypothetical protein LOC100261732-2e-22At5g56950NAP1O.I.H.G.S.X.
0.4464.10.981620143_atBQ794466hypothetical protein LOC100248167-1e+0At4g03290calcium-binding protein, putativeO.I.H.G.S.X.
0.4260.10.981617378_atCB978610hypothetical protein LOC100265457-7e-43At5g13780GCN5-related N-acetyltransferase, putativeO.I.H.G.S.X.
0.3650.70.981609775_atBQ797173similar to Os11g0123400-8e-18At2g38670PECT1 (PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1)O.I.H.G.S.X.
0.3650.70.981616871_atCF404278hypothetical protein LOC100253007 /// similar to putative dihydrolipoamide succinyltransferase-3e-26At4g269102-oxoacid dehydrogenase family proteinO.I.H.G.S.X.
0.3345.70.981613194_atCF213913hypothetical protein LOC100258632-4e-23At5g42000ORMDL family proteinO.I.H.G.S.X.
0.3345.70.981620819_atBQ797308hypothetical protein LOC100244100-1e-135At1g54270EIF4A-2O.I.H.G.S.X.
0.2530.50.981622212_atBQ798158hypothetical protein LOC100250769-3e-54At2g46280TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.2327.50.981620593_atBQ797219hypothetical protein LOC100252659-1e-97At1g30580GTP bindingO.I.H.G.S.X.
0.2022.40.981616080_atCF511120hypothetical protein LOC100254062-5e-13At5g42970COP8 (CONSTITUTIVE PHOTOMORPHOGENIC 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.189.1GSM299459D_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.088.2GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.088.2GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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