Co-expression analysis

Gene ID 1611396_at
Gene name hypothetical protein LOC100253893
Homology with ArabidopsisSimilar to At1g05136: unknown protein (HF=3e-1)
Module size 6 genes
NF 0.63
%ile 89.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.971611396_atBQ800511hypothetical protein LOC100253893-3e-1At1g05136unknown proteinO.I.H.G.S.X.
0.7390.80.971621668_atBQ792797similar to Histone H2B-2e-27At3g46030HTB11O.I.H.G.S.X.
0.6787.90.981616611_atCF404283--2e-1At2g33220-O.I.H.G.S.X.
0.6183.20.961620070_atCF215679hypothetical protein LOC100244193-3e-1At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.
0.4666.50.971620600_atCF373014hypothetical protein LOC100258054-4e+0At3g26800unknown proteinO.I.H.G.S.X.
0.4464.10.971622084_atCF513595hypothetical protein LOC100256435-1e+0At5g51451unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.793.0GSM287869Green hard berry C3 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM287883Green soft berry A23 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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