Co-expression analysis

Gene ID	1611382_at
Gene name	hypothetical protein LOC100264955
Homology with Arabidopsis	Similar to At3g53850: - (HF=2e-6)
Module size	6 genes
NF	0.59
%ile	85.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1611382_at	CF212352	hypothetical protein LOC100264955	-	2e-6	At3g53850	-	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1620164_at	CF414117	hypothetical protein LOC100263547	-	6e+0	At5g10160	beta-hydroxyacyl-ACP dehydratase, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1610422_at	CF215178	hypothetical protein LOC100246625	-	5e-12	At3g51670	SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1622002_at	CF513939	hypothetical protein LOC100264846	-	2e-1	At1g29951	CPuORF35 (Conserved peptide upstream open reading frame 35)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1613351_at	CB972999	hypothetical protein LOC100252023	-	2e-1	At5g12970	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1620990_at	CF511811	hypothetical protein LOC100247103	-	1e-18	At1g19330	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM287881	Green soft berry B10 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.6	92.5	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.5	91.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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