Co-expression analysis

Gene ID 1611358_at
Gene name
Homology with ArabidopsisSimilar to At1g61370: S-locus lectin protein kinase family protein (HF=9e-8)
Module size 6 genes
NF 0.11
%ile 18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.841611358_atCD006705--9e-8At1g61370S-locus lectin protein kinase family proteinO.I.H.G.S.X.
0.1819.40.931615053_atCD711659--1e+0At4g39986unknown proteinO.I.H.G.S.X.
0.1111.30.931622881_x_atCK136938.1--7e-5At2g39770CYT1 (CYTOKINESIS DEFECTIVE 1)O.I.H.G.S.X.
0.1010.30.931612527_atCF568913--1e+0At1g69600ZFHD1 (ZINC FINGER HOMEODOMAIN 1)O.I.H.G.S.X.
0.077.80.931619014_atCB343548--1e+0At2g46280TRIP-1 (TGF-BETA RECEPTOR INTERACTING PROTEIN 1)O.I.H.G.S.X.
0.034.20.931620333_atCF608264--1e-10At3g08020protein binding / zinc ion bindingO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.699.5GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.797.7GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
4.497.3GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
3.796.2GSM147709Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation38Link to GEO
3.796.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
3.294.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.194.6GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.194.6GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.893.4GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig20782_at, orthologous to the query gene, 1611358_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5774.9Contig20782_atAt1g61370--4e-5At4g23230protein kinase family proteinO.I.H.G.S.X.
0.4458.9HV_CEb0015D05r2_atAt1g61370--1e+0At5g47077LCR6 (Low-molecular-weight cysteine-rich 6)O.I.H.G.S.X.
0.3545.1HI09E23r_atAt1g61370--3e+0At1g50470-O.I.H.G.S.X.
0.3240.3HVSMEm0005J13r2_atAt1g61370--3e-4At3g03800SYP131 (SYNTAXIN OF PLANTS 131)O.I.H.G.S.X.
0.2935.5Contig7975_atAt1g61370--1e-1At4g35600CONNEXIN 32O.I.H.G.S.X.
0.2732.1Contig17645_atAt1g61370--2e+0At3g56810unknown proteinO.I.H.G.S.X.
0.2528.9HV08J24u_x_atAt1g61370--1e+0At2g35605SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2528.9Contig1138_atAt1g61370--2e-14At1g07790HTB1O.I.H.G.S.X.
0.2427.2Contig21217_atAt1g61370--2e+0At5g64810WRKY51O.I.H.G.S.X.
0.2122.6Contig18688_atAt1g61370--5e+0At5g09260VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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