Co-expression analysis

Gene ID 1611320_at
Gene name hypothetical protein LOC100268157
Homology with ArabidopsisSimilar to At3g16520: UDP-glucoronosyl/UDP-glucosyl transferase family protein (HF=2e-8)
Module size 6 genes
NF 0.05
%ile 11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.901611320_atCF206248.1hypothetical protein LOC100268157-2e-8At3g16520UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.6081.90.891619986_s_atCD800813hypothetical protein LOC100268157-2e-5At3g16520UDP-glucoronosyl/UDP-glucosyl transferase family proteinO.I.H.G.S.X.
0.077.80.941615469_atCB974963--1e-3At4g13390proline-rich extensin-like family proteinO.I.H.G.S.X.
0.056.00.931617033_atCF511776hypothetical protein LOC100250388-9e-10At1g28470ANAC010 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 10)O.I.H.G.S.X.
0.034.20.921620367_atCF415391hypothetical protein LOC100243368-7e-8At4g23740leucine-rich repeat transmembrane protein kinase, putativeO.I.H.G.S.X.
0.023.20.941619450_s_atCF215109hypothetical protein LOC100258977-6e-63At5g54160ATOMT1 (O-METHYLTRANSFERASE 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5Link to GEO
1.987.2GSM287871Green hard berry C4 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM147684Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation13Link to GEO
1.886.0GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage