Co-expression analysis

Gene ID	1611308_at
Gene name	hypothetical protein LOC100248182
Homology with Arabidopsis	Similar to At3g47810: MAG1 (MAIGO 1) (HF=6e-4)
Module size	8 genes
NF	0.70
%ile	94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.98	1611308_at	CF202925.1	hypothetical protein LOC100248182	-	6e-4	At3g47810	MAG1 (MAIGO 1)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1619577_at	CF213082	hypothetical protein LOC100266782	-	1e+0	At4g28950	ROP9 (RHO-RELATED PROTEIN FROM PLANTS 9)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1617343_s_at	CB972670	-	-	4e+0	At5g65870	ATPSK5 (PHYTOSULFOKINE 5 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1606938_at	CD802354	hypothetical protein LOC100265256	-	4e-72	At1g52740	HTA9 (HISTONE H2A PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1617631_at	CD798963	hypothetical protein LOC100264042	-	8e-9	At2g42210	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1620509_at	CF213694	hypothetical protein LOC100248585	-	2e-21	At4g39220	ATRER1A	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1618016_at	CB350120	hypothetical protein LOC100247325	-	3e-1	At5g35740	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.9	97.9	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.3	95.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.3	90.7	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.1	89.1	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.0	88.2	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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