| Gene ID | 1611211_at |
| Gene name | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase |
| Homology with Arabidopsis | Similar to At1g22410: 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative (HF=3e-10) |
| Module size | 6 genes |
| NF | 0.40 |
| %ile | 59.6 |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 11.3 | 99.7 | GSM322363 | genotype: Chardonnay - disease type: Bois Noir infected - rep3 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 9.2 | 99.5 | GSM322361 | genotype: Chardonnay - disease type: Bois Noir infected - rep1 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 5.4 | 98.3 | GSM322364 | genotype: Chardonnay - disease type: Healthy - rep1 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 3.8 | 96.4 | GSM287869 | Green hard berry C3 from plant 1 cluster distal position, biological rep 1 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 2.9 | 93.8 | GSM436348 | Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3 | GSE17502 | Photoperiod regulation of grape bud dormancy | |
| 2.8 | 93.4 | GSM322369 | genotype: Incrocio Manzoni - disease type: Healthy - rep1 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 2.6 | 92.5 | GSM322366 | genotype: Chardonnay - disease type: Healthy - rep3 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 2.5 | 91.9 | GSM322362 | genotype: Chardonnay - disease type: Bois Noir infected - rep2 | GSE12842 | Gene expression in grapevine in response to Bois noir infection | |
| 2.4 | 91.3 | GSM436372 | Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3 | GSE17502 | Photoperiod regulation of grape bud dormancy | |
| 2.4 | 91.3 | GSM287875 | Green hard berry C17 from plant 2 cluster proximal position, biological rep 2 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.78 | 93.4 | Os03g0389700 | At1g22410 | - | Phospho-2-dehydro-3-deoxyheptonate aldolase 1,chloroplast precursor (EC 2.5.1.54)(Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHPsynthetase 1) (3-deoxy-D-arabino-heptulosonate7-phosphate synthase 1) | 2e-42 | At1g22410 | 2-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putative | O.I. | H.G. | S.X. | |
| 0.74 | 91.4 | Os08g0157500 | At1g22410 | - | Caffeic acid 3-O-methyltransferase (EC 2.1.1.68)(S-adenosysl-L- methionine:caffeic acid3-O-methyltransferase) (COMT) (CAOMT) | 2e-7 | At5g54160 | ATOMT1 (O-METHYLTRANSFERASE 1) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os02g0735200 | At1g22410 | - | Glutamine synthetase shoot isozyme (EC 6.3.1.2)(Glutamate--ammonia ligase) (Clone lambda-GS28) | 9e-78 | At3g17820 | ATGSKB6 | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os08g0498100 | At1g22410 | - | Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)(Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2)(CCoAOMT-2) | 2e+0 | At3g54000 | - | O.I. | H.G. | S.X. | |
| 0.64 | 83.4 | Os11g0455800 | At1g22410 | - | Serine hydroxymethyltransferase (EC 2.1.2.1)(Serine methylase) (Glycine hydroxymethyltransferase)(SHMT) | 3e-68 | At4g13930 | SHM4 (serine hydroxymethyltransferase 4) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os05g0168500 | At1g22410 | - | Nonaspanin (TM9SF) family protein | 2e-27 | At4g12650 | - | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os01g0323600 | At1g22410 | - | S-adenosylmethionine synthetase 2 (EC 2.5.1.6)(Methionine adenosyltransferase 2) (AdoMet synthetase 2) | 2e-100 | At1g02500 | SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1) | O.I. | H.G. | S.X. | |
| 0.55 | 73.7 | Os02g0626100 | At1g22410 | - | Phenylalanine ammonia-lyase (EC 4.3.1.5) | 4e+0 | At2g03430 | ankyrin repeat family protein | O.I. | H.G. | S.X. | |
| 0.47 | 62.3 | Os03g0815200 | At1g22410 | - | Methylenetetrahydrofolate reductase (EC 1.5.1.20) | 3e-44 | At2g44160 | MTHFR2 (METHYLENETETRAHYDROFOLATE REDUCTASE 2) | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os05g0494000 | At1g22410 | - | Cytochrome P450 98A1 (EC 1.14.-.-) | 2e-5 | At2g40890 | CYP98A3 (cytochrome P450, family 98, subfamily A, polypeptide 3) | O.I. | H.G. | S.X. | |
| 0.39 | 48.3 | Os12g0623900 | At1g22410 | - | Ethylene-responsive methionine synthase (Fragment) | 0 | At5g17920 | ATMS1 | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os07g0424400 | At1g22410 | - | Cellulose synthase-7 | 1e-51 | At2g21770 | CESA9 (CELLULOSE SYNTHASE A9) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Zea_mays |
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