Co-expression analysis

Gene ID 1611192_at
Gene name hypothetical protein LOC100268056
Homology with ArabidopsisSimilar to At5g12020: HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN) (HF=5e-10)
Module size 6 genes
NF 0.72
%ile 95.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.851611192_atCB348409hypothetical protein LOC100268056-5e-10At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)O.I.H.G.S.X.
0.9198.80.851609222_atCF518991hypothetical protein LOC100263588-5e-9At4g10250ATHSP22.0O.I.H.G.S.X.
0.6787.90.801621652_atCF518056hypothetical protein LOC100262206-6e-9At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.6787.90.851614614_atCB910349hypothetical protein LOC100256846-2e-2At2g46240BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6)O.I.H.G.S.X.
0.6081.90.851616145_a_atBQ794473hypothetical protein LOC100261583-1e-3At1g5354017.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)O.I.H.G.S.X.
0.4057.70.861620960_a_atCF515315hypothetical protein LOC100253085 /// hypothetical protein LOC100263355-6e-3At3g46230ATHSP17.4O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.2GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.897.8GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.297.1GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM287898Red soft berry B14 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM287904Red soft berry C31 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.096.7GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.696.0GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.793.0GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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