Co-expression analysis

Gene ID 1611191_at
Gene name hypothetical protein LOC100264622
Homology with ArabidopsisSimilar to At5g11850: protein kinase family protein (HF=1e-60)
Module size 29 genes
NF 0.35
%ile 50.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8293.90.971611191_atCF207954hypothetical protein LOC100264622-1e-60At5g11850protein kinase family proteinO.I.H.G.S.X.
0.6283.30.971609109_atCB922980hypothetical protein LOC100249946-3e-2At1g05720selenoprotein family proteinO.I.H.G.S.X.
0.5779.80.971615991_s_atCF404409hypothetical protein LOC100241833-1e-22At4g38130HD1 (HISTONE DEACETYLASE 1)O.I.H.G.S.X.
0.5375.20.971622800_atCB973155hypothetical protein LOC100251355-4e+0At2g42040-O.I.H.G.S.X.
0.4767.70.981613489_atCF403663--5e+0At3g25572CPuORF11 (Conserved peptide upstream open reading frame 11)O.I.H.G.S.X.
0.4666.50.971617625_atCB006850hypothetical LOC100246722-2e-6At3g05680EMB2016 (embryo defective 2016)O.I.H.G.S.X.
0.4564.60.971615058_atCB349554hypothetical protein LOC100251131-4e+0At3g28290AT14AO.I.H.G.S.X.
0.4361.50.981606661_atCD004606hypothetical protein LOC100246447-2e+0At5g08050-O.I.H.G.S.X.
0.3954.90.971615411_s_atBQ799375hypothetical protein LOC100266324-3e-4At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.
0.3751.70.981619248_atCA813733hypothetical protein LOC100264750-3e-1At5g18100CSD3 (copper/zinc superoxide dismutase 3)O.I.H.G.S.X.
0.3650.70.971610376_atCB922451hypothetical protein LOC100241274-8e-6At5g65540unknown proteinO.I.H.G.S.X.
0.3548.50.981618197_atBQ797561hypothetical protein LOC100250454-4e-3At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.3446.80.981612818_atCF414592hypothetical protein LOC100265822-6e-33At1g51060HTA10O.I.H.G.S.X.
0.3345.70.971611691_s_atCB980403hypothetical protein LOC100265089-6e-59At5g36290unknown proteinO.I.H.G.S.X.
0.3345.70.981613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1O.I.H.G.S.X.
0.3345.70.971619832_atCA818684hypothetical protein LOC100240976-1e-24At3g44660hda10 (histone deacetylase 10)O.I.H.G.S.X.
0.3243.10.971609942_atCF210968hypothetical protein LOC100262467-5e+0At5g67580TRB2O.I.H.G.S.X.
0.3039.40.981616131_atCB973358similar to Os01g0104000-1e+0At1g11470-O.I.H.G.S.X.
0.2937.70.971614103_atCF515571hypothetical protein LOC100257061-2e-2At3g12140emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.2734.00.981609452_atBQ794280hypothetical protein LOC100249768-3e-1At4g31460ribosomal protein L28 family proteinO.I.H.G.S.X.
0.2734.00.971616913_atBQ796394hypothetical protein LOC100250143-7e-2At5g05570transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2734.00.971618802_s_atCF205022.1hypothetical protein LOC100264326-9e-4At1g34780ATAPRL4 (APR-like 4)O.I.H.G.S.X.
0.2632.00.981615702_atBQ797006hypothetical protein LOC100268087-4e-5At1g17980nucleotidyltransferase family proteinO.I.H.G.S.X.
0.2632.00.981616218_atCF415652hypothetical protein LOC100247532-1e-13At2g42240nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.2530.50.971620908_atCD013688hypothetical protein LOC100247344-3e-102At4g28880ckl3 (Casein Kinase I-like 3)O.I.H.G.S.X.
0.2327.50.981615632_a_atCB977610hypothetical protein LOC100262698-3e-13At3g57870SCE1 (SUMO CONJUGATION ENZYME 1)O.I.H.G.S.X.
0.1920.90.981611111_atCF207166hypothetical protein LOC100256502-3e-33At1g63500ATP binding / binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.1819.40.981614110_s_atCD801616cullin 1-2e-19At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.
0.1819.40.981617244_s_atCB341989hypothetical protein LOC100262315-1e-23At4g22150PUX3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.886.0GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.784.7GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.784.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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