Co-expression analysis

Gene ID	1611089_at
Gene name	hypothetical protein LOC100245763 /// hypothetical protein LOC100250595
Homology with Arabidopsis	Similar to At5g49665: zinc finger (C3HC4-type RING finger) family protein (HF=1e+0)
Module size	6 genes
NF	0.28
%ile	40.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	67.7	0.94	1611089_at	CF518359	hypothetical protein LOC100245763 /// hypothetical protein LOC100250595	-	1e+0	At5g49665	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1617587_at	CF403573	hypothetical protein LOC100246521	-	1e+0	At4g24750	-	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.95	1612434_at	CD710767	hypothetical protein LOC100257120	-	5e-8	At2g30520	RPT2 (ROOT PHOTOTROPISM 2)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.95	1620085_at	CF516195	hypothetical protein LOC100266649	-	1e+0	At1g23240	caleosin-related family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.94	1621827_at	CF373383	similar to flowering locus C-like MADS-box protein	-	4e-11	At2g45650	AGL6 (AGAMOUS-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1620920_at	CB349109	hypothetical protein LOC100245710	-	6e-5	At1g70950	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
3.8	96.4	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
3.7	96.2	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
3.5	95.7	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.9	93.8	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.8	93.4	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.3	90.7	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.2	89.9	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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