Co-expression analysis

Gene ID	1611052_at
Gene name
Homology with Arabidopsis	Similar to At5g12030: AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A) (HF=4e-7)
Module size	44 genes
NF	0.15
%ile	23.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.99	100.0	0.85	1611052_at	CD718520	-	-	4e-7	At5g12030	AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.97	1610622_at	CD799955	hypothetical protein LOC100244354	-	2e-1	At4g19150	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.94	1618975_at	CD006441	-	-	4e-4	At1g55680	WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.97	1614128_at	CB916225	similar to ubiquitin carrier protein	-	5e-82	At1g14400	UBC1 (UBIQUITIN CARRIER PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1612786_at	CB977888	hypothetical protein LOC100252486	-	5e-7	At5g11490	adaptin family protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.96	1612768_at	CF403786	hypothetical protein LOC100244114	-	1e+0	At4g19100	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.95	1619876_at	AF176496.1	-	-	7e-13	At1g09640	elongation factor 1B-gamma, putative / eEF-1B gamma, putative	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.94	1611655_at	CB913871	-	-	3e-32	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.93	1610301_at	CD717279	-	-	3e-1	At1g67590	remorin family protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.94	1613291_at	CF972323.1	-	-	4e-4	At3g13410	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1622781_a_at	CF214778	hypothetical protein LOC100252992	-	1e-46	At3g09900	ATRABE1E (ARABIDOPSIS RAB GTPASE HOMOLOG E1E)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1619504_at	CF516503	hypothetical protein LOC100260370	-	2e+0	At3g03870	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1608847_at	CB919160	similar to nuclear movement family protein	-	6e-49	At5g58740	nuclear movement family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1614481_at	CD006441	hypothetical protein LOC100253167	-	4e-4	At1g55680	WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1609386_at	BQ798112	hypothetical protein LOC100248340	-	4e-1	At5g14030	translocon-associated protein beta (TRAPB) family protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.96	1622171_at	CB975783	hypothetical protein LOC100244384	-	6e-28	At5g60670	60S ribosomal protein L12 (RPL12C)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.96	1620881_at	CF568956	-	-	3e-4	At5g54900	ATRBP45A (RNA-binding protein 45A)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1619963_a_at	CD715008	hypothetical protein LOC100261868	-	1e-19	At4g21560	VPS28-1 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1620870_s_at	BQ794210	hypothetical protein LOC100251175	-	3e-18	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1614367_at	CF515268	-	-	7e+0	At5g42410	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.96	1612549_at	CB913437	-	-	6e-6	At2g24590	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.95	1608117_at	CB980860	-	-	1e+0	At3g07510	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1606564_at	CB918153	hypothetical protein LOC100245330	-	1e-2	At3g23710	chloroplast inner membrane import protein Tic22, putative	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.94	1611372_at	CD711835	-	-	9e-61	At1g43890	ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.94	1617607_at	CB918932	-	-	3e-2	At4g17090	CT-BMY (CHLOROPLAST BETA-AMYLASE)	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.93	1607436_at	CF568907	-	-	5e-24	At3g60820	PBF1	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1620076_s_at	CA809762	hypothetical protein LOC100254960	-	6e-15	At1g15270	-	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1613515_at	CA809086	hypothetical protein LOC100257134	-	2e-1	At2g24070	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1620560_at	CB002563	hypothetical protein LOC100261542	-	1e+0	At4g40080	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.97	1610389_s_at	CA818339	hypothetical protein LOC100261052	-	1e-13	At4g15000	60S ribosomal protein L27 (RPL27C)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.96	1614025_x_at	AF141899.1	aquaporin-like /// aquaporin PIP1;5	-	4e-76	At4g23400	PIP1	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.98	1611040_at	BQ794523	hypothetical protein LOC100263053	-	3e-7	At1g65020	-	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.94	1620139_at	CB914494	-	-	1e-9	At3g07170	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.97	1614941_s_at	CA809258	hypothetical protein LOC100265806	-	9e-17	At5g64350	FKBP12 (FK506-BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.93	1617224_at	CB915321	-	-	4e+0	At4g30380	EXLB2 (EXPANSIN-LIKE B2 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.97	1612566_at	CF208882	-	-	4e-128	At2g47170	ARF1A1C	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.99	1608096_at	CB978907	hypothetical protein LOC100264515	-	6e-59	At5g39850	40S ribosomal protein S9 (RPS9C)	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.98	1612888_at	CF406033	-	-	4e+0	At4g16080	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.98	1608087_s_at	CF568810	glyceraldehyde-3-phosphate dehydrogenase	-	2e-103	At1g13440	GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.95	1622126_at	CF568916	-	-	7e-8	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.93	1616067_at	CF415216	hypothetical protein LOC100264459	-	9e-7	At1g14980	CPN10 (CHAPERONIN 10)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.98	1621022_at	BQ794425	hypothetical protein LOC100255295	-	7e-43	At3g02080	40S ribosomal protein S19 (RPS19A)	O.I.	H.G.	S.X.	Please select
0.05	6.0	0.92	1619616_at	BQ798767	hypothetical protein LOC100254733	-	3e-9	At2g29500	17.6 kDa class I small heat shock protein (HSP17.6B-CI)	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.95	1616706_at	CF207563	hypothetical LOC100265979	-	8e-11	At4g12400	stress-inducible protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.0	88.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.8	86.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.8	86.0	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.7	84.7	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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