Co-expression analysis

Gene ID 1611002_s_at
Gene name hypothetical protein LOC100246998
Homology with ArabidopsisSimilar to At3g10210: - (HF=6e-13)
Module size 9 genes
NF 0.53
%ile 78.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.981611002_s_atCB969717hypothetical protein LOC100246998-6e-13At3g10210-O.I.H.G.S.X.
0.6484.70.981607202_s_atCD797631hypothetical protein LOC100242295-2e-65At5g23090NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)O.I.H.G.S.X.
0.5980.60.981613281_atCF513460hypothetical protein LOC100249314-4e-33At3g22440hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5679.40.981616182_atCB978298hypothetical protein LOC100242352-1e-16At1g14650SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family proteinO.I.H.G.S.X.
0.5375.20.981607823_s_atCF405744hypothetical protein LOC100263158-1e+0At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5072.70.981614665_s_atBQ799768similar to Tubby; Cyclin-like F-box-5e-16At1g53320AtTLP7 (TUBBY LIKE PROTEIN 7)O.I.H.G.S.X.
0.4868.80.981611180_atBQ795485hypothetical protein LOC100263350-5e+0At3g28455CLE25 (CLAVATA3/ESR-RELATED 25)O.I.H.G.S.X.
0.4666.50.991613129_atCB970410hypothetical protein LOC100266068-2e-13At4g17330ATG2484-1O.I.H.G.S.X.
0.3243.10.981615901_atCF405787hypothetical protein LOC100248277-5e+0At4g13075RALFL30 (RALF-LIKE 30)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.893.4GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO
2.692.5GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147738Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation67Link to GEO
2.088.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.088.2GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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