Co-expression analysis

Gene ID	1610996_at
Gene name	pectinesterase
Homology with Arabidopsis	Similar to At1g53840: ATPME1 (HF=2e-9)
Module size	6 genes
NF	0.17
%ile	25.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.94	1610996_at	BQ794786	pectinesterase	-	2e-9	At1g53840	ATPME1	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.93	1616299_at	CB979735	hypothetical LOC100241800	-	1e+0	At3g51440	strictosidine synthase family protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.94	1606781_at	BQ796322	hypothetical protein LOC100257470	-	5e-6	At5g45600	GAS41	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1612103_at	CF212327	hypothetical protein LOC100249678	-	1e-150	At3g46440	UXS5	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1620930_s_at	CF212327	hypothetical protein LOC100249678	-	1e-150	At3g46440	UXS5	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.94	1610668_at	CF405328	hypothetical protein LOC100264076	-	4e-6	At5g54390	AHL (ARABIDOPSIS HAL2-LIKE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	98.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.3	90.7	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM436374	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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