Co-expression analysis

Gene ID	1610952_at
Gene name	hypothetical protein LOC100256999
Homology with Arabidopsis	Similar to At3g17680: - (HF=4e+0)
Module size	6 genes
NF	0.37
%ile	54.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.96	1610952_at	BQ796872	hypothetical protein LOC100256999	-	4e+0	At3g17680	-	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1619722_at	CF213692	hypothetical protein LOC100246022	-	7e-26	At5g19010	MPK16	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1607144_at	CB971726	similar to plasma membrane H+ ATPase	-	1e-175	At3g47950	AHA4	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1617746_at	CF214456	hypothetical protein LOC100248500	-	0	At5g17920	ATMS1	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1619274_at	CD718648	similar to BY-2 kinesin-like protein 10	-	3e-1	At3g17152	enzyme inhibitor/ pectinesterase	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1613630_s_at	BQ794547	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	0	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.5	91.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.4	91.3	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.1	89.1	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.0	88.2	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436377	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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