Co-expression analysis

Gene ID	1610939_at
Gene name	hypothetical protein LOC100240812
Homology with Arabidopsis	Similar to At3g05420: ACBP4 (ACYL-COA BINDING PROTEIN 4) (HF=5e-9)
Module size	8 genes
NF	0.48
%ile	71.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.96	1610939_at	CF608429	hypothetical protein LOC100240812	-	5e-9	At3g05420	ACBP4 (ACYL-COA BINDING PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.97	1607803_at	CB975690	hypothetical protein LOC100264130	-	7e-8	At1g20200	EMB2719 (EMBRYO DEFECTIVE 2719)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1619940_at	CF518701	hypothetical protein LOC100241361 /// hypothetical protein LOC100261422	-	3e-2	At2g32980	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1618104_at	CA808387	hypothetical protein LOC100267860	-	1e+0	At3g43880	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1609738_at	CF518474	similar to ZFWD1 (zinc finger WD40 repeat protein 1); nucleic acid binding / zinc ion binding	-	1e+0	At4g17565	F-box family protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1614355_at	CF604126	-	-	7e-8	At1g12050	fumarylacetoacetase, putative	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.97	1608757_at	CB349275	hypothetical protein LOC100266172	-	3e-17	At5g14250	COP13 (CONSTITUTIVE PHOTOMORPHOGENIC 13)	O.I.	H.G.	S.X.	Please select
0.34	46.8	0.97	1620795_at	CF214162	hypothetical protein LOC100255110	-	4e-40	At3g09630	60S ribosomal protein L4/L1 (RPL4A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.4	91.3	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.4	91.3	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.4	91.3	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
2.4	91.3	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.2	89.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.0	88.2	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.0	88.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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