Co-expression analysis

Gene ID 1610901_at
Gene name hypothetical protein LOC100266451
Homology with ArabidopsisSimilar to At5g15120: unknown protein (HF=1e-19)
Module size 8 genes
NF 0.13
%ile 21.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.931610901_atBQ799025hypothetical protein LOC100266451-1e-19At5g15120unknown proteinO.I.H.G.S.X.
0.2327.50.951610302_atCF215148hypothetical protein LOC100266800-1e-3At5g211705'-AMP-activated protein kinase beta-2 subunit, putativeO.I.H.G.S.X.
0.2225.60.961622490_atCF208094hypothetical protein LOC100262793-6e-1At1g68490unknown proteinO.I.H.G.S.X.
0.2225.60.961608543_atCF518889hypothetical protein LOC100263773-1e-14At3g61600ATPOB1O.I.H.G.S.X.
0.1313.30.931620340_s_atCA813675hypothetical protein LOC100257545-1e+0At4g03270CYCD6O.I.H.G.S.X.
0.1313.30.961608918_atBQ792513hypothetical protein LOC100256015-2e-6At2g24500FZFO.I.H.G.S.X.
0.088.50.951613560_atCB976184hypothetical protein LOC100241749-4e-3At5g24260prolyl oligopeptidase family proteinO.I.H.G.S.X.
0.066.80.931613535_atCD799741hypothetical protein LOC100264394-2e-25At5g04510PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.498.3GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.297.1GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.194.6GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM287891Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.893.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.491.3GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.491.3GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.390.7GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.289.9GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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