Co-expression analysis

Gene ID	1610901_at
Gene name	hypothetical protein LOC100266451
Homology with Arabidopsis	Similar to At5g15120: unknown protein (HF=1e-19)
Module size	8 genes
NF	0.13
%ile	21.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.93	1610901_at	BQ799025	hypothetical protein LOC100266451	-	1e-19	At5g15120	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.95	1610302_at	CF215148	hypothetical protein LOC100266800	-	1e-3	At5g21170	5'-AMP-activated protein kinase beta-2 subunit, putative	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1622490_at	CF208094	hypothetical protein LOC100262793	-	6e-1	At1g68490	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.96	1608543_at	CF518889	hypothetical protein LOC100263773	-	1e-14	At3g61600	ATPOB1	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.93	1620340_s_at	CA813675	hypothetical protein LOC100257545	-	1e+0	At4g03270	CYCD6	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1608918_at	BQ792513	hypothetical protein LOC100256015	-	2e-6	At2g24500	FZF	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.95	1613560_at	CB976184	hypothetical protein LOC100241749	-	4e-3	At5g24260	prolyl oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.93	1613535_at	CD799741	hypothetical protein LOC100264394	-	2e-25	At5g04510	PDK1 (3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	98.3	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.2	97.1	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM287891	Pink soft berry B23 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.8	93.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.4	91.3	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.4	91.3	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.3	90.7	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.2	89.9	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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