Co-expression analysis

Gene ID 1610899_at
Gene name hypothetical protein LOC100265829
Homology with ArabidopsisSimilar to At3g20390: endoribonuclease L-PSP family protein (HF=6e-34)
Module size 8 genes
NF 0.48
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5475.70.981610899_atCA818813hypothetical protein LOC100265829-6e-34At3g20390endoribonuclease L-PSP family proteinO.I.H.G.S.X.
0.6183.20.991609751_atCA817020hypothetical protein LOC100253636-5e-51At5g18520-O.I.H.G.S.X.
0.5072.70.981610844_atBQ794886hypothetical LOC100257700-5e-18At1g28490SYP61 (SYNTAXIN OF PLANTS 61)O.I.H.G.S.X.
0.5072.70.981611513_s_atCF414212hypothetical protein LOC100262157-2e-1At3g49950scarecrow transcription factor family proteinO.I.H.G.S.X.
0.4666.50.981613385_s_atCF513747hypothetical protein LOC100253611-2e-62At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)O.I.H.G.S.X.
0.4666.50.981621699_atCF212982hypothetical protein LOC100248753-2e-35At5g09260VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)O.I.H.G.S.X.
0.4361.50.981616842_s_atCA814075hypothetical protein LOC100248125-5e-1At3g27080TOM20-3 (TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3)O.I.H.G.S.X.
0.3243.10.981616458_s_atCF515510hypothetical protein LOC100256310-1e-1At3g43910unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.698.4GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.595.7GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM436413V. riparia (VR, PI588259) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM287894Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM436346Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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