Co-expression analysis

Gene ID 1610833_at
Gene name
Homology with ArabidopsisSimilar to At5g18920: unknown protein (HF=4e-3)
Module size 35 genes
NF 0.41
%ile 61.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8895.40.961610833_atCF414275--4e-3At5g18920unknown proteinO.I.H.G.S.X.
0.6384.30.981608904_atCK138119.1similar to F2D10.18-6e-9At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.5980.60.981606938_atCD802354hypothetical protein LOC100265256-4e-72At1g52740HTA9 (HISTONE H2A PROTEIN 9)O.I.H.G.S.X.
0.5779.80.981618133_atCF404967hypothetical protein LOC100259114-2e-1At5g28610-O.I.H.G.S.X.
0.5679.40.971606676_atCF403737hypothetical protein LOC100245560-9e-2At1g05060unknown proteinO.I.H.G.S.X.
0.5475.70.981612905_s_atCB345326hypothetical protein LOC100258381-5e-3At1g12830unknown proteinO.I.H.G.S.X.
0.5475.70.971615091_atCD801426hypothetical protein LOC100242289-2e-2At1g13770-O.I.H.G.S.X.
0.5475.70.971621197_atCB971609hypothetical protein LOC100258812-1e-56At5g59910HTB4O.I.H.G.S.X.
0.5173.20.971619134_atCB971759--2e+0At5g53720RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4969.30.971611171_atCD003897hypothetical protein LOC100256369-6e-13At3g52570ATP bindingO.I.H.G.S.X.
0.4868.80.971615137_atCB347116hypothetical protein LOC100256319-6e-159At1g56340CRT1 (CALRETICULIN 1)O.I.H.G.S.X.
0.4564.60.971609041_atCF207716hypothetical protein LOC100264096-4e+0At3g21338unknown proteinO.I.H.G.S.X.
0.4464.10.971607156_atCD801776hypothetical protein LOC100248126-2e-2At4g21150HAP6 (HAPLESS 6)O.I.H.G.S.X.
0.4464.10.981617631_atCD798963hypothetical protein LOC100264042-8e-9At2g42210mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.4464.10.971615026_atCB971780hypothetical protein LOC100260296-1e+0At2g29125RTFL2 (ROTUNDIFOLIA LIKE 2)O.I.H.G.S.X.
0.4361.50.971617773_atCB978900hypothetical protein LOC100245942-1e+0At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.4260.10.971609625_atCB972846similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein-6e-2At1g62390octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.4158.70.971617792_atCB348351hypothetical protein LOC100253720-2e-3At5g14820pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3954.90.981609633_s_atCB971333hypothetical protein LOC100254082-3e-1At4g15735SCRL10 (SCR-Like 10)O.I.H.G.S.X.
0.3853.60.981608298_atBQ795521--3e-1At5g66370unknown proteinO.I.H.G.S.X.
0.3345.70.971615825_s_atCB915659hypothetical protein LOC100260692-8e-1At3g46666unknown proteinO.I.H.G.S.X.
0.3345.70.981617010_s_atCF203247.1hypothetical LOC100258532-6e-1At5g38300unknown proteinO.I.H.G.S.X.
0.3345.70.971618016_atCB350120hypothetical protein LOC100247325-3e-1At5g35740glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.3345.70.971619506_s_atCB981155hypothetical protein LOC100250330-4e-5At2g16595-O.I.H.G.S.X.
0.3243.10.981607743_atCF513620hypothetical protein LOC100252303-5e-12At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.3243.10.971613104_atCB006723hypothetical protein LOC100257801-6e-35At5g63510GAMMA CAL1 (GAMMA CARBONIC ANHYDRASE LIKE 1)O.I.H.G.S.X.
0.3243.10.981615027_s_atCB977478hypothetical protein LOC100246785-1e-15At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3141.30.981609620_atCB979452--7e+0At5g51845-O.I.H.G.S.X.
0.3039.40.971616142_atBQ792884hypothetical protein LOC100258968-3e-5At3g57785unknown proteinO.I.H.G.S.X.
0.2937.70.971622119_s_atCB915301hypothetical protein LOC100258911-4e-19At3g04780-O.I.H.G.S.X.
0.2937.70.971621355_atCD005679hypothetical protein LOC100242227-3e-7At4g29735unknown proteinO.I.H.G.S.X.
0.2734.00.981614091_atCD798618hypothetical protein LOC100253367-4e-12At5g25230elongation factor Tu family proteinO.I.H.G.S.X.
0.2632.00.981620460_atBQ792558hypothetical protein LOC100263447-3e-7At3g54670TTN8 (TITAN8)O.I.H.G.S.X.
0.2327.50.971619148_atCF513297hypothetical protein LOC100263958-6e-2At3g12130KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.1920.90.981621288_atCB972014hypothetical protein LOC100252015-2e+0At5g50030invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
1.987.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.784.7GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
1.784.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
1.683.3GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.683.3GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.581.7GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM436407V. riparia (VR, PI588259) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.581.7GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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