Co-expression analysis

Gene ID	1610729_at
Gene name	hypothetical protein LOC100257029
Homology with Arabidopsis	Similar to At5g44020: acid phosphatase class B family protein (HF=3e+0)
Module size	6 genes
NF	0.41
%ile	60.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.95	1610729_at	CD798441	hypothetical protein LOC100257029	-	3e+0	At5g44020	acid phosphatase class B family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1616710_at	CF515503	hypothetical protein LOC100248331	-	2e-8	At3g56370	leucine-rich repeat transmembrane protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1608238_at	BQ800567	hypothetical protein LOC100247004	-	1e+0	At1g56660	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1607578_at	CF415519	hypothetical protein LOC100247175	-	1e+0	At5g57000	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1608211_at	CD798213	hypothetical protein LOC100247578	-	6e+0	At3g55490	-	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.96	1618230_at	CD801769	hypothetical protein LOC100245789	-	2e+0	At4g21090	adrenodoxin-like ferredoxin 1	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	97.5	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
3.4	95.5	GSM147702	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	31
2.8	93.4	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
2.7	93.0	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.4	91.3	GSM147678	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	7
2.2	89.9	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
2.1	89.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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