Co-expression analysis

Gene ID 1610669_at
Gene name hypothetical protein LOC100259403
Homology with ArabidopsisSimilar to At1g69825: - (HF=6e-2)
Module size 10 genes
NF 0.48
%ile 72.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.961610669_atCF208675hypothetical protein LOC100259403-6e-2At1g69825-O.I.H.G.S.X.
0.6384.30.971617270_atCF209681--2e+0At4g36260STY2 (STYLISH 2)O.I.H.G.S.X.
0.5779.80.981622665_s_atCF215188hypothetical protein LOC100246461-5e+0At5g19257unknown proteinO.I.H.G.S.X.
0.5577.30.981616820_atCF210812--2e-1At3g27835-O.I.H.G.S.X.
0.5375.20.971607161_atCF372023--2e+0At2g18721unknown proteinO.I.H.G.S.X.
0.5072.70.971609364_atCD013445similar to thioredoxin-related protein-8e-6At3g56580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4464.10.981618126_atCF213298hypothetical protein LOC100261549-3e-8At1g76660-O.I.H.G.S.X.
0.4361.50.971608899_atCF513763hypothetical protein LOC100266255-8e-8At1g25580ANAC008 (Arabidopsis NAC domain containing protein 8)O.I.H.G.S.X.
0.4057.70.981616920_atCF512566hypothetical protein LOC100251933-2e-12At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.3243.10.971610932_atCF209452hypothetical protein LOC100261114-9e-1At2g32645unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.696.0GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.495.5GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.591.9GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
2.491.3GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM436410V. riparia (VR, PI588259) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436412V. riparia (VR, PI588259) SD, 13h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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