Co-expression analysis

Gene ID	1610629_at
Gene name
Homology with Arabidopsis	Similar to At5g06030: self-incompatibility protein-related (HF=4e+0)
Module size	6 genes
NF	0.11
%ile	18.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.79	1610629_at	CB345477	-	-	4e+0	At5g06030	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.92	1617438_at	CF405183	-	-	9e-1	At4g21500	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.94	1610470_at	CF202637.1	-	-	1e-7	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.93	1619188_at	CF204375.1	-	-	2e+0	At1g48940	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.06	6.8	0.93	1617917_at	CF405637	-	-	4e+0	At1g53100	acetylglucosaminyltransferase	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.93	1612237_at	BQ795624	-	-	8e-11	At4g24240	WRKY7	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.2	99.4	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.5	98.4	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.5	98.4	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.5	98.4	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.3	97.2	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.9	96.6	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.6	92.5	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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