Co-expression analysis

Gene ID 1610600_at
Gene name hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829
Homology with ArabidopsisSimilar to At3g08580: AAC1 (ADP/ATP CARRIER 1) (HF=3e-1)
Module size 6 genes
NF 0.60
%ile 86.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.921610600_atCA813949hypothetical protein LOC100242774 /// hypothetical protein LOC100248732 /// hypothetical protein LOC100253829-3e-1At3g08580AAC1 (ADP/ATP CARRIER 1)O.I.H.G.S.X.
0.7390.80.931613603_atCF211665hypothetical protein LOC100248706-1e-7At1g47670amino acid transporter family proteinO.I.H.G.S.X.
0.6183.20.891613837_atCF605759hypothetical protein LOC100248706-4e-4At1g47670amino acid transporter family proteinO.I.H.G.S.X.
0.5072.70.931617483_atCD799044hypothetical protein LOC100267019-1e+0At2g04170meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.4666.50.931609744_atCF203760.1hypothetical protein LOC100240811 /// hypothetical protein LOC100263073-2e+0At3g42630pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2327.50.921609397_atCF512090hypothetical protein LOC100248717-1e-35At5g64300ATGCHO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.997.9GSM287867Green hard berry C1 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO
2.591.9GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
2.289.9GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.088.2GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147726Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation55Link to GEO
1.987.2GSM147714Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation43Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At3g08580, orthologous to the query gene, 1610600_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.2726.2At3g08580820005AAC1 (ADP/ATP CARRIER 1)mitochondrial ADP/ATP carrierO.I.H.G.S.X.
0.9697.3At1g49140841337NADH-ubiquinone oxidoreductase-relatedF:unknown;P:photorespiration;C:mitochondrion, mitochondrial membrane, respiratory chain complex I;FPMO.I.H.G.S.X.
0.9095.1At5g47570834807unknown proteinF:molecular_function unknown;P:biological_process unknown;C:respiratory chain complex I;POO.I.H.G.S.X.
0.7385.5At4g34700829622complex 1 family protein / LVR family proteinF:catalytic activity;P:photorespiration;C:mitochondrial membrane, plasma membrane, respiratory chain complex I;MFPOO.I.H.G.S.X.
0.7184.2At4g37830829939cytochrome c oxidase-relatedF:cytochrome-c oxidase activity;P:unknown;C:mitochondrion;MPOO.I.H.G.S.X.
0.6378.1At3g08610820008unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion, respiratory chain complex I;PO.I.H.G.S.X.
0.6176.7At1g26550839195peptidyl-prolyl cis-trans isomerase PPIC-type family proteinF:isomerase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPAO.I.H.G.S.X.
0.6176.7At2g20820816613unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PO.I.H.G.S.X.
0.5974.7At2g33040817866ATP synthase gamma chain, mitochondrial (ATPC)F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:in 7 components;OBMFPAO.I.H.G.S.X.
0.5974.7At4g29480829069mitochondrial ATP synthase g subunit family proteinF:hydrogen ion transmembrane transporter activity;P:proton transport, ATP synthesis coupled proton transport;C:mitochondrion;POO.I.H.G.S.X.
0.4457.2At5g52840835361NADH-ubiquinone oxidoreductase-relatedF:oxidoreductase activity, acting on NADH or NADPH;P:photorespiration;C:mitochondrion, mitochondrial membrane, chloroplast, respiratory chain complex I, membrane;MFPOO.I.H.G.S.X.
0.4253.9At4g32470829382ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, plasma membrane, plastid, mitochondrial respiratory chain complex III, membrane;MPFOO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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