Co-expression analysis

Gene ID	1610598_at
Gene name
Homology with Arabidopsis	Similar to At5g20060: phospholipase/carboxylesterase family protein (HF=4e+0)
Module size	6 genes
NF	0.27
%ile	37.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.96	1610598_at	CA818645	-	-	4e+0	At5g20060	phospholipase/carboxylesterase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1611306_at	CB972831	hypothetical protein LOC100245465	-	2e-6	At5g04630	CYP77A9	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1622517_at	CB970523	UPF0497 membrane protein 11	-	4e-1	At1g17200	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.95	1614089_at	CF511077	hypothetical protein LOC100252201	-	1e+0	At3g14260	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.96	1610279_s_at	CF415234	hypothetical protein LOC100261504	-	2e-12	At5g19290	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1606646_at	CA812296	hypothetical protein LOC100264115	-	2e-23	At5g09870	CESA5 (CELLULOSE SYNTHASE 5)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.2	94.9	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.5	91.9	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.0	88.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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