Co-expression analysis

Gene ID	1610593_at
Gene name
Homology with Arabidopsis	Similar to At4g16390: - (HF=1e-35)
Module size	7 genes
NF	0.44
%ile	65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.92	1610593_at	CD715465	-	-	1e-35	At4g16390	-	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.92	1620815_at	CF568885	-	-	1e-15	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.94	1610514_at	AF176655.1	ripening induced protein	-	2e-1	At4g33750	-	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.93	1613388_at	CF568873	-	-	1e-9	At4g25370	Clp amino terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.93	1608467_at	CD003740	-	-	8e-22	At1g17220	FUG1 (fu-gaeri1)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.93	1617585_at	CD005877	-	-	2e-11	At3g14930	HEME1	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.93	1619495_at	CA818305	-	-	1e-4	At1g44920	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	98.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.1	98.1	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.5	97.5	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.0	96.7	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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