Co-expression analysis

Gene ID 1610593_at
Gene name
Homology with ArabidopsisSimilar to At4g16390: - (HF=1e-35)
Module size 7 genes
NF 0.44
%ile 65.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4464.10.921610593_atCD715465--1e-35At4g16390-O.I.H.G.S.X.
0.5679.40.921620815_atCF568885--1e-15At1g45230defective chloroplasts and leaves protein-related / DCL protein-relatedO.I.H.G.S.X.
0.4361.50.941610514_atAF176655.1ripening induced protein-2e-1At4g33750-O.I.H.G.S.X.
0.4260.10.931613388_atCF568873--1e-9At4g25370Clp amino terminal domain-containing proteinO.I.H.G.S.X.
0.4260.10.931608467_atCD003740--8e-22At1g17220FUG1 (fu-gaeri1)O.I.H.G.S.X.
0.3954.90.931617585_atCD005877--2e-11At3g14930HEME1O.I.H.G.S.X.
0.2530.50.931619495_atCA818305--1e-4At1g44920unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.298.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
5.198.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.597.5GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.096.7GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM322364genotype: Chardonnay - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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