Co-expression analysis

Gene ID 1610570_at
Gene name hypothetical protein LOC100246879
Homology with ArabidopsisSimilar to At5g24430: calcium-dependent protein kinase, putative / CDPK, putative (HF=2e-24)
Module size 6 genes
NF 0.54
%ile 79.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.50.961610570_atCA807939hypothetical protein LOC100246879-2e-24At5g24430calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.6787.90.971610597_atBQ800069hypothetical protein LOC100251901-2e-9At2g24100unknown proteinO.I.H.G.S.X.
0.6081.90.961606642_atCB920109hypothetical protein LOC100257219-1e-3At2g21620RD2O.I.H.G.S.X.
0.5072.70.971612510_atCB919682hypothetical protein LOC100250654-1e-10At2g11520CRCK3O.I.H.G.S.X.
0.4464.10.961613560_atCB976184hypothetical protein LOC100241749-4e-3At5g24260prolyl oligopeptidase family proteinO.I.H.G.S.X.
0.4057.70.961617932_atCF511103hypothetical protein LOC100260043-2e-43At5g51570band 7 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.399.2GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
6.498.9GSM436418V. riparia (VR, PI588259) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.996.6GSM436379Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.896.4GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.893.4GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.793.0GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.591.9GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436411V. riparia (VR, PI588259) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436365Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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