Co-expression analysis

Gene ID	1610570_at
Gene name	hypothetical protein LOC100246879
Homology with Arabidopsis	Similar to At5g24430: calcium-dependent protein kinase, putative / CDPK, putative (HF=2e-24)
Module size	6 genes
NF	0.54
%ile	79.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.5	0.96	1610570_at	CA807939	hypothetical protein LOC100246879	-	2e-24	At5g24430	calcium-dependent protein kinase, putative / CDPK, putative	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1610597_at	BQ800069	hypothetical protein LOC100251901	-	2e-9	At2g24100	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1606642_at	CB920109	hypothetical protein LOC100257219	-	1e-3	At2g21620	RD2	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1612510_at	CB919682	hypothetical protein LOC100250654	-	1e-10	At2g11520	CRCK3	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1613560_at	CB976184	hypothetical protein LOC100241749	-	4e-3	At5g24260	prolyl oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1617932_at	CF511103	hypothetical protein LOC100260043	-	2e-43	At5g51570	band 7 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	99.2	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
6.4	98.9	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.9	96.6	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.8	96.4	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.8	93.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.7	93.0	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.5	91.9	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436365	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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