Co-expression analysis

Gene ID	1610562_at
Gene name	hypothetical protein LOC100249618
Homology with Arabidopsis	Similar to At2g39130: amino acid transporter family protein (HF=4e-32)
Module size	6 genes
NF	0.46
%ile	68.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.95	1610562_at	CF514967	hypothetical protein LOC100249618	-	4e-32	At2g39130	amino acid transporter family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1610655_at	CF516542	hypothetical protein LOC100245840	-	1e-32	At5g11160	APT5 (Adenine phosphoribosyltransferase 5)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.95	1617587_at	CF403573	hypothetical protein LOC100246521	-	1e+0	At4g24750	-	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.95	1620085_at	CF516195	hypothetical protein LOC100266649	-	1e+0	At1g23240	caleosin-related family protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.95	1618573_at	CF216076	-	-	3e-2	At1g29220	transcriptional regulator family protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.96	1620920_at	CB349109	hypothetical protein LOC100245710	-	6e-5	At1g70950	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.8	96.4	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.5	95.7	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.1	94.6	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
3.1	94.6	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.9	93.8	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.8	93.4	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.8	93.4	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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