Co-expression analysis

Gene ID 1610560_at
Gene name hypothetical protein LOC100258347
Homology with ArabidopsisSimilar to At3g47370: 40S ribosomal protein S20 (RPS20B) (HF=7e-52)
Module size 6 genes
NF 0.83
%ile 98.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.991610560_atBQ797613hypothetical protein LOC100258347-7e-52At3g4737040S ribosomal protein S20 (RPS20B)O.I.H.G.S.X.
0.9198.80.991613860_s_atCF512506cyc07-6e-38At3g0484040S ribosomal protein S3A (RPS3aA)O.I.H.G.S.X.
0.7390.80.991610095_s_atCF516594hypothetical protein LOC100257471-9e-49At5g2390060S ribosomal protein L13 (RPL13D)O.I.H.G.S.X.
0.7390.80.991608096_atCB978907hypothetical protein LOC100264515-6e-59At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.6787.90.991610092_atBQ794603hypothetical protein LOC100250286-2e-18At5g1838040S ribosomal protein S16 (RPS16C)O.I.H.G.S.X.
0.5072.70.991620069_s_atCB969496hypothetical protein LOC100248991-9e-51At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.297.1GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.696.0GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
3.395.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM147713Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation42Link to GEO
2.591.9GSM436356Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
2.390.7GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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