Co-expression analysis

Gene ID 1610514_at
Gene name ripening induced protein
Homology with ArabidopsisSimilar to At4g33750: - (HF=2e-1)
Module size 6 genes
NF 0.52
%ile 77.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.941610514_atAF176655.1ripening induced protein-2e-1At4g33750-O.I.H.G.S.X.
0.8093.60.941613388_atCF568873--1e-9At4g25370Clp amino terminal domain-containing proteinO.I.H.G.S.X.
0.5375.20.941607083_atCB002933--4e+0At3g17950unknown proteinO.I.H.G.S.X.
0.5072.70.941614270_atCD010750--3e-20At3g07670SET domain-containing proteinO.I.H.G.S.X.
0.4057.70.951622413_atCD714494--3e-1At4g39070zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.2022.40.941618102_atCF415084--7e-37At2g18710SCY1 (SecY Homolog 1)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.390.7GSM436380Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147686Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation15Link to GEO
2.088.2GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436376Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage