Co-expression analysis

Gene ID 1610473_at
Gene name hypothetical protein LOC100259805
Homology with ArabidopsisSimilar to At3g10980: unknown protein (HF=3e-1)
Module size 8 genes
NF 0.26
%ile 36.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7892.60.951610473_atCD008037hypothetical protein LOC100259805-3e-1At3g10980unknown proteinO.I.H.G.S.X.
0.4057.70.951611092_atCF208653--3e-1At3g51890protein binding / structural moleculeO.I.H.G.S.X.
0.4057.70.951618465_atCB918507hypothetical protein LOC100252099-2e-39At5g14640SK13 (SHAGGY-LIKE KINASE 13)O.I.H.G.S.X.
0.3650.70.971609974_atCB977877hypothetical protein LOC100267017-2e-61At4g26610D6PKL1 (D6 PROTEIN KINASE LIKE 1)O.I.H.G.S.X.
0.3650.70.971620375_atCA814054hypothetical protein LOC100252099-3e-13At3g05840ATSK12O.I.H.G.S.X.
0.3345.70.951607428_atCD801140hypothetical protein LOC100268022-2e-2At5g06980unknown proteinO.I.H.G.S.X.
0.1313.30.951611922_atCD799103hypothetical protein LOC100245782-2e-1At3g49770unknown proteinO.I.H.G.S.X.
0.077.80.951619464_atCA818609hypothetical protein LOC100254564-3e-11At1g79160unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436396V. riparia (VR, PI588259) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436388V. riparia (VR, PI588259) LD, 15h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
2.189.1GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.189.1GSM436399V. riparia (VR, PI588259) LD, 15h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60Link to GEO
1.987.2GSM147714Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation43Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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