Co-expression analysis

Gene ID	1610470_at
Gene name
Homology with Arabidopsis	Similar to At5g15150: ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3) (HF=1e-7)
Module size	7 genes
NF	0.49
%ile	72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	68.8	0.94	1610470_at	CF202637.1	-	-	1e-7	At5g15150	ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.94	1614154_at	CF568802	-	-	7e-8	At1g72440	EDA25 (embryo sac development arrest 25)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.94	1608135_at	CF206119.1	-	-	1e+0	At2g47650	UXS4 (UDP-XYLOSE SYNTHASE 4)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.95	1615204_at	CF371804	-	-	1e+0	At3g21580	cobalt ion transmembrane transporter	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1618712_at	CB003306	-	-	3e-1	At4g21330	DYT1 (DYSFUNCTIONAL TAPETUM 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.94	1617917_at	CF405637	-	-	4e+0	At1g53100	acetylglucosaminyltransferase	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.95	1620333_at	CF608264	-	-	1e-10	At3g08020	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147737	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	66
2.0	88.2	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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