Co-expression analysis

Gene ID	1610469_at
Gene name	hypothetical protein LOC100263345
Homology with Arabidopsis	Similar to At3g55440: TPI (TRIOSEPHOSPHATE ISOMERASE) (HF=8e-65)
Module size	6 genes
NF	0.50
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.5	0.97	1610469_at	BQ799636	hypothetical protein LOC100263345	-	8e-65	At3g55440	TPI (TRIOSEPHOSPHATE ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1612018_at	CF208964	hypothetical protein LOC100262681	-	2e-31	At4g24620	PGI1 (PHOSPHOGLUCOSE ISOMERASE 1)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.97	1622766_at	CF209938	hypothetical protein LOC100240939	-	3e-127	At1g09430	ACLA-3	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1615852_a_at	CA816288	hypothetical protein LOC100241670 /// hypothetical protein LOC100263948	-	8e-8	At1g22450	COX6B (CYTOCHROME C OXIDASE 6B)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1606799_s_at	CB968910	hypothetical protein LOC100253273 /// hypothetical protein LOC100248145	-	4e-101	At1g04410	malate dehydrogenase, cytosolic, putative	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1613072_at	BQ798026	similar to dicarboxylate/tricarboxylate carrier	-	6e-29	At5g19760	dicarboxylate/tricarboxylate carrier (DTC)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.4	91.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.3	90.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
1.9	87.2	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.8	86.0	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
1.8	86.0	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
1.7	84.7	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
1.7	84.7	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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