Co-expression analysis

Gene ID	1610354_s_at
Gene name	hypothetical protein LOC100244095
Homology with Arabidopsis	Similar to At3g48930: EMB1080 (embryo defective 1080) (HF=1e-50)
Module size	6 genes
NF	0.73
%ile	95.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1610354_s_at	CF511640	hypothetical protein LOC100244095	-	1e-50	At3g48930	EMB1080 (embryo defective 1080)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1607660_at	CA812263	similar to ribosomal protein L17	-	6e-80	At1g04480	60S ribosomal protein L23 (RPL23A)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1614350_at	CF517395	hypothetical protein LOC100242146	-	4e-72	At4g00100	ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.99	1613237_at	CF371897	hypothetical protein LOC100254540	-	1e-19	At3g04230	40S ribosomal protein S16 (RPS16B)	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.99	1610630_at	CB002854	hypothetical protein LOC100260347	-	3e-14	At3g56340	40S ribosomal protein S26 (RPS26C)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1621022_at	BQ794425	hypothetical protein LOC100255295	-	7e-43	At3g02080	40S ribosomal protein S19 (RPS19A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	97.7	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.6	92.5	GSM436424	V. riparia (VR, PI588259) SD, 13h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147684	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	13
2.5	91.9	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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