Co-expression analysis

Gene ID	1610344_at
Gene name	hypothetical protein LOC100246080
Homology with Arabidopsis	Similar to At1g21000: zinc-binding family protein (HF=9e-22)
Module size	7 genes
NF	0.52
%ile	77.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.91	1610344_at	BQ796295	hypothetical protein LOC100246080	-	9e-22	At1g21000	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.91	1612648_at	CD798203	hypothetical protein LOC100260257	-	3e-1	At1g42960	-	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.92	1608066_at	CB342796	hypothetical protein LOC100254977	-	5e-1	At5g43570	serine-type endopeptidase inhibitor	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.90	1620203_at	CB970029	-	-	2e+0	At5g54110	ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.92	1617575_s_at	CD800130	hypothetical protein LOC100246832	-	1e-1	At3g15360	TRX-M4 (ARABIDOPSIS THIOREDOXIN M-TYPE 4)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.92	1622142_at	CB839449	hypothetical protein LOC100261425	-	1e+0	At3g02885	GASA5 (GAST1 PROTEIN HOMOLOG 5)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.91	1610505_at	CD801882	hypothetical protein LOC100260568	-	5e-16	At2g47710	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.9	93.8	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.5	91.9	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.4	91.3	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.3	90.7	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.3	90.7	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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