Co-expression analysis

Gene ID	1610317_at
Gene name
Homology with Arabidopsis	Similar to At1g52200: unknown protein (HF=5e-1)
Module size	6 genes
NF	0.04
%ile	8.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.91	1610317_at	CF404990	-	-	5e-1	At1g52200	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.95	1607773_at	CD719602	-	-	2e-30	At5g07290	AML4 (ARABIDOPSIS MEI2-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.95	1609587_at	CF202068.1	-	-	5e-9	At1g32220	binding / catalytic/ coenzyme binding	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.93	1617904_at	CD010829	-	-	5e-3	At5g05390	LAC12 (laccase 12)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.94	1612796_at	CK136917.1	-	-	5e-34	At2g29080	ftsh3 (FtsH protease 3)	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.96	1607928_at	CF201793.1	-	-	5e-3	At4g08230	glycine-rich protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.6	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.7	93.0	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436404	V. riparia (VR, PI588259) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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