Co-expression analysis

Gene ID 1610317_at
Gene name
Homology with ArabidopsisSimilar to At1g52200: unknown protein (HF=5e-1)
Module size 6 genes
NF 0.04
%ile 8.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.911610317_atCF404990--5e-1At1g52200unknown proteinO.I.H.G.S.X.
0.4464.10.951607773_atCD719602--2e-30At5g07290AML4 (ARABIDOPSIS MEI2-LIKE 4)O.I.H.G.S.X.
0.1212.10.951609587_atCF202068.1--5e-9At1g32220binding / catalytic/ coenzyme bindingO.I.H.G.S.X.
0.1010.30.931617904_atCD010829--5e-3At5g05390LAC12 (laccase 12)O.I.H.G.S.X.
0.012.10.941612796_atCK136917.1--5e-34At2g29080ftsh3 (FtsH protease 3)O.I.H.G.S.X.
0.012.10.961607928_atCF201793.1--5e-3At4g08230glycine-rich proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436405V. riparia (VR, PI588259) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM436423V. riparia (VR, PI588259) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436419V. riparia (VR, PI588259) SD, 13h 14 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.793.0GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.793.0GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.390.7GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436404V. riparia (VR, PI588259) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436395V. riparia (VR, PI588259) LD, 15h 7 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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