Co-expression analysis

Gene ID	1610302_at
Gene name	hypothetical protein LOC100266800
Homology with Arabidopsis	Similar to At5g21170: 5'-AMP-activated protein kinase beta-2 subunit, putative (HF=1e-3)
Module size	7 genes
NF	0.45
%ile	67.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.96	1610302_at	CF215148	hypothetical protein LOC100266800	-	1e-3	At5g21170	5'-AMP-activated protein kinase beta-2 subunit, putative	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1617401_at	CF210307	hypothetical protein LOC100263342	-	1e-1	At5g66730	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1613145_at	CF215652	hypothetical protein LOC100255313	-	6e-22	At5g47180	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1610763_at	CD714601	hypothetical protein LOC100263330	-	1e+0	At3g48880	F-box family protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.97	1611826_at	CB977629	hypothetical protein LOC100262670	-	2e-9	At4g25500	ATRSP35	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1614523_at	CF212775	hypothetical protein LOC100250951	-	2e-2	At1g15350	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.97	1614895_at	CD799483	hypothetical protein LOC100253502	-	3e-16	At1g16430	surfeit locus protein 5 family protein / SURF5 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.0	98.7	GSM287875	Green hard berry C17 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
5.4	98.3	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.4	98.3	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
5.2	98.2	GSM287895	Pink soft berry B13 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.9	96.6	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.8	96.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.2	94.9	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.0	94.2	GSM287894	Pink soft berry C26 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.0	94.2	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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