Co-expression analysis

Gene ID	1610300_at
Gene name
Homology with Arabidopsis	Similar to At3g23200: unknown protein (HF=9e-7)
Module size	7 genes
NF	0.53
%ile	79.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.95	1610300_at	CF518694	-	-	9e-7	At3g23200	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.96	1618259_at	BM436271	hypothetical LOC100245758	-	3e-32	At5g65780	ATBCAT-5	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.95	1615660_at	CF215672	similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase	-	1e-51	At4g27960	UBC9 (UBIQUITIN CONJUGATING ENZYME 9)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.95	1615915_at	CF518741	hypothetical protein LOC100267889	-	4e+0	At2g24880	self-incompatibility protein-related	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.95	1612330_at	CF372664	hypothetical protein LOC100242653	-	2e-8	At1g71750	phosphoribosyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1608292_at	CA817093	hypothetical protein LOC100241035	-	7e-30	At5g57690	diacylglycerol kinase	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.95	1615832_at	BQ792735	hypothetical protein LOC100242360	-	1e-10	At2g24860	chaperone protein dnaJ-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.5	91.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.2	89.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.2	89.9	GSM436393	V. riparia (VR, PI588259) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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