Co-expression analysis

Gene ID 1610277_at
Gene name hypothetical protein LOC100257821
Homology with ArabidopsisSimilar to At1g17710: phosphatase (HF=2e-1)
Module size 13 genes
NF 0.39
%ile 58.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7390.80.961610277_atCF208016hypothetical protein LOC100257821-2e-1At1g17710phosphataseO.I.H.G.S.X.
0.5375.20.971611084_atCA816784--6e+0At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)O.I.H.G.S.X.
0.4464.10.971610423_s_atCB977222hypothetical protein LOC100250124-5e-6At2g02960zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4464.10.981612201_atCF404051hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.4260.10.971619134_atCB971759--2e+0At5g53720RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.4057.70.971617471_atBQ796087hypothetical protein LOC100266752-1e+0Atmg00850-O.I.H.G.S.X.
0.4057.70.971611698_atCA812037hypothetical protein LOC100263780-2e+0At5g65360histone H3O.I.H.G.S.X.
0.3243.10.971615091_atCD801426hypothetical protein LOC100242289-2e-2At1g13770-O.I.H.G.S.X.
0.3243.10.981621862_atCF510931hypothetical protein LOC100267900-2e+0At1g1593040S ribosomal protein S12 (RPS12A)O.I.H.G.S.X.
0.3039.40.981608374_atCF214105--3e-1At4g03153kinase interacting family proteinO.I.H.G.S.X.
0.2837.70.971611343_atCB974830hypothetical protein LOC100261168-6e+0At3g15210ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)O.I.H.G.S.X.
0.1920.90.981615885_atCF405402hypothetical protein LOC100257916-1e+0At4g15640unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.893.4GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
2.793.0GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.491.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
2.289.9GSM147733Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation62Link to GEO
2.289.9GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
2.189.1GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
1.886.0GSM436358Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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