Co-expression analysis

Gene ID	1610277_at
Gene name	hypothetical protein LOC100257821
Homology with Arabidopsis	Similar to At1g17710: phosphatase (HF=2e-1)
Module size	13 genes
NF	0.39
%ile	58.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.96	1610277_at	CF208016	hypothetical protein LOC100257821	-	2e-1	At1g17710	phosphatase	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1611084_at	CA816784	-	-	6e+0	At3g26690	ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1610423_s_at	CB977222	hypothetical protein LOC100250124	-	5e-6	At2g02960	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1612201_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.97	1619134_at	CB971759	-	-	2e+0	At5g53720	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1617471_at	BQ796087	hypothetical protein LOC100266752	-	1e+0	Atmg00850	-	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.97	1611698_at	CA812037	hypothetical protein LOC100263780	-	2e+0	At5g65360	histone H3	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1615091_at	CD801426	hypothetical protein LOC100242289	-	2e-2	At1g13770	-	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.98	1621862_at	CF510931	hypothetical protein LOC100267900	-	2e+0	At1g15930	40S ribosomal protein S12 (RPS12A)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.98	1608374_at	CF214105	-	-	3e-1	At4g03153	kinase interacting family protein	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1611343_at	CB974830	hypothetical protein LOC100261168	-	6e+0	At3g15210	ERF4 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1609620_at	CB979452	-	-	7e+0	At5g51845	-	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1615885_at	CF405402	hypothetical protein LOC100257916	-	1e+0	At4g15640	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.8	93.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.7	93.0	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.4	91.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.2	89.9	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.2	89.9	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.2	89.9	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.1	89.1	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.0	88.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
1.8	86.0	GSM436358	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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