Co-expression analysis

Gene ID	1610274_at
Gene name
Homology with Arabidopsis	Similar to At1g50440: zinc finger (C3HC4-type RING finger) family protein (HF=3e+0)
Module size	6 genes
NF	0.01
%ile	1.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.70	1610274_at	CB344448	-	-	3e+0	At1g50440	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.94	1610127_at	CB920325	-	-	1e-1	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1611551_at	CD713530	-	-	2e-24	At2g17410	ARID/BRIGHT DNA-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.94	1614482_at	CF206009.1	hypothetical protein LOC100241833	-	2e-21	At4g38130	HD1 (HISTONE DEACETYLASE 1)	O.I.	H.G.	S.X.	Please select
-	0.5	0.87	1607129_at	CA809446	-	-	2e-1	At2g04380	unknown protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.90	1614253_at	CB971268	hypothetical protein LOC100252844	-	5e-15	At4g02610	tryptophan synthase, alpha subunit, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.6	96.0	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
3.4	95.5	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.4	95.5	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.5	91.9	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.2	89.9	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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