Co-expression analysis

Gene ID 1610169_at
Gene name hypothetical protein LOC100250570
Homology with ArabidopsisSimilar to At2g22570: NIC1 (NICOTINAMIDASE 1) (HF=1e-4)
Module size 7 genes
NF 0.19
%ile 27.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7390.80.911610169_atBQ797205hypothetical protein LOC100250570-1e-4At2g22570NIC1 (NICOTINAMIDASE 1)O.I.H.G.S.X.
0.5679.40.911622563_atCF514103hypothetical protein LOC100248493-1e-15At3g12800SDRB (SHORT-CHAIN DEHYDROGENASE-REDUCTASE B)O.I.H.G.S.X.
0.4464.10.951608565_atCA817135hypothetical protein LOC100247719-1e+0At4g13200unknown proteinO.I.H.G.S.X.
0.2734.00.911621790_atCF214824hypothetical protein LOC100254475-5e+0At1g67440emb1688 (embryo defective 1688)O.I.H.G.S.X.
0.1819.40.911608337_atBQ792532hypothetical protein LOC100260571-2e-15At5g66110metal ion bindingO.I.H.G.S.X.
0.1313.30.921613103_atCD802483hypothetical protein LOC100249419-3e+0At5g16440IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1)O.I.H.G.S.X.
0.056.00.911617802_atBQ793493hypothetical protein LOC100248493-9e-11At2g07640D2,D4-dienoyl-CoA reductase-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM287901Red soft berry C16 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM287897Red soft berry C29 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.088.2GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.886.0GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
1.784.7GSM147715Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation44Link to GEO
1.784.7GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.784.7GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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