Co-expression analysis

Gene ID	1610165_at
Gene name
Homology with Arabidopsis	Similar to At4g33550: lipid binding (HF=2e+0)
Module size	6 genes
NF	0.07
%ile	14.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.86	1610165_at	CF204000.1	-	-	2e+0	At4g33550	lipid binding	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1606685_at	CB348042	-	-	5e-1	At2g15770	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1610029_s_at	CB980191	-	-	2e-1	At1g79790	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.07	7.8	0.96	1622113_at	CF209612	hypothetical protein LOC100245719	-	4e-61	At5g15050	glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein	O.I.	H.G.	S.X.	Please select
0.04	5.2	0.96	1616425_at	CF208709	hypothetical protein LOC100260616	-	5e-7	At2g32730	26S proteasome regulatory subunit, putative	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.94	1619939_at	CB971326	-	-	2e+1	At5g43430	ETFBETA	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM436350	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.5	95.7	GSM436399	V. riparia (VR, PI588259) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436397	V. riparia (VR, PI588259) LD, 15h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.1	89.1	GSM436392	V. riparia (VR, PI588259) LD, 15h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
1.9	87.2	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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