Co-expression analysis

Gene ID 1610125_at
Gene name
Homology with ArabidopsisSimilar to At2g41540: GPDHC1 (HF=1e-3)
Module size 6 genes
NF 0.29
%ile 41.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6183.20.921610125_atCF209614--1e-3At2g41540GPDHC1O.I.H.G.S.X.
0.5072.70.931622107_atCB009545hypothetical protein LOC100259620-2e-40At5g55560protein kinase family proteinO.I.H.G.S.X.
0.4057.70.921611872_atCF404465hypothetical protein LOC100266256-8e-50At2g26640KCS11 (3-KETOACYL-COA SYNTHASE 11)O.I.H.G.S.X.
0.2327.50.931610143_atCF405294hypothetical protein LOC100264398-1e+0At3g27630unknown proteinO.I.H.G.S.X.
0.1515.60.941621632_atBQ794172hypothetical protein LOC100266611-9e-28At3g54020phosphatidic acid phosphatase-related / PAP2-relatedO.I.H.G.S.X.
0.1313.30.941609576_atBQ794740hypothetical protein LOC100254953-4e+0At5g57400unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.796.2GSM322365genotype: Chardonnay - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.696.0GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.495.5GSM436392V. riparia (VR, PI588259) LD, 15h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.395.2GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO
3.294.9GSM322370genotype: Incrocio Manzoni - disease type: Healthy - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.194.6GSM436363Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.194.6GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.094.2GSM436348Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM436414V. riparia (VR, PI588259) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.993.8GSM147727Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation56Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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