Co-expression analysis

Gene ID	1610122_at
Gene name
Homology with Arabidopsis	Similar to At2g26150: ATHSFA2 (HF=4e-24)
Module size	6 genes
NF	0.81
%ile	98.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.89	1610122_at	CF517531	-	-	4e-24	At2g26150	ATHSFA2	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.91	1616889_at	CB348538	hypothetical protein LOC100253548	-	5e-7	At4g25200	ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.90	1622628_at	CB349013	hypothetical protein LOC100244609	-	3e-2	At1g54050	17.4 kDa class III heat shock protein (HSP17.4-CIII)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.90	1616811_at	CB347142	hypothetical protein LOC100252168	-	4e-21	At2g20560	DNAJ heat shock family protein	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.86	1621357_s_at	CF518673	similar to HSC70-1 (heat shock cognate 70 kDa protein 1); ATP binding	-	5e-153	At5g02500	HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.90	1621552_at	BM437510	hypothetical protein LOC100249249	-	9e-27	At3g24500	MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.2	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.6	96.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.3	95.2	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436346	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.1	94.6	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.8	93.4	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.7	93.0	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.7	93.0	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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