Co-expression analysis

Gene ID	1610009_at
Gene name
Homology with Arabidopsis	Similar to At1g31812: ACBP6 (acyl-CoA-binding protein 6) (HF=2e-11)
Module size	8 genes
NF	0.35
%ile	50.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	84.7	0.95	1610009_at	CF205831.1	-	-	2e-11	At1g31812	ACBP6 (acyl-CoA-binding protein 6)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1612469_at	CF205528.1	hypothetical protein LOC100248700	-	3e-5	At4g34190	SEP1 (STRESS ENHANCED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.97	1614462_at	CB343121	-	-	4e-63	Atcg00300	-	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.96	1612289_at	CD012364	hypothetical protein LOC100267301	-	1e-1	At2g11773	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.97	1606526_at	BQ799338	hypothetical protein LOC100244223	-	4e-3	At3g07565	DNA binding	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1622247_at	CB001362	hypothetical protein LOC100244197	-	3e+0	At2g28800	ALB3 (ALBINO 3)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.96	1621345_x_at	CF204350.1	-	-	4e+0	At4g28703	-	O.I.	H.G.	S.X.	Please select
0.20	22.4	0.96	1607271_at	BQ800406	hypothetical protein LOC100258274	-	2e-2	At3g26070	plastid-lipid associated protein PAP / fibrillin family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	98.2	GSM299455	C_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
4.1	96.9	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM299458	D_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM299462	D_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.9	93.8	GSM299460	D_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM299451	B_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM299459	D_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.4	91.3	GSM436419	V. riparia (VR, PI588259) SD, 13h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436426	V. riparia (VR, PI588259) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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